Fig. 2: Genomic landscape of soybean.
From: The patterns of deleterious mutations during the domestication of soybean
a Chromosomes based on the Williams 82 reference genome sequence v. Wm82.a2.v1 (a). Centromere repeat regions are indicated by gray bands. Gene density heatmap (b). SNP density (c). Indel density (d). Population recombination rates calculated in 1 Mb windows (blue = historical recombination rate and red = estimates of recombination rate from mapping populations (e). SV density (f). Average GERP score density (>0), with dark blue of high GERP score (g). All window sizes are 100 kb except recombination rates. b Mean LD scores estimated with a 1 Mb window.
