Fig. 3: X-, 4th-, and Y-linked gene expression patterns across cell types.
From: Dynamic sex chromosome expression in Drosophila male germ cells
Cell type-specific gene expression of a X-linked genes and b 4th-linked genes scaled by major autosomal element gene expression (2nd and 3rd chromosomes) at cellular resolution [e.g., (X TPM/ #X Genes)/(A TPM/ # A Genes). c Y-linked gene expression and d genome-wide expression in normalized read counts. Chromosomal distributions in germ cells, significantly different from somatic cell types, are indicated with an asterisk (a, b p ≤ 0.01 using permutation test, c: q-value ≤ 0.01 using χ2 test). a–d The number of cells scored are: G = 1065, E1 = 1267, M1 = 4570, L1 = 2667, C1 = 4064, C2 = 1230, C3 = 910, C4 = 945, T = 1379, P = 868. Boxplots (box = interquartile range (IQR), notch = 95% confidence interval of median, whiskers = ± 1.5xIQR).
