Table 1 Hyper-parameters search space for WT-specific model.
From: Overcoming the design, build, test bottleneck for synthesis of nonrepetitive protein-RNA cassettes
Parameter space | Final parameters (protein, prefix) | ||||||
|---|---|---|---|---|---|---|---|
Parameter | Initial space | MCP-C | MCP-GC | QCP-C | QCP-GC | PCP-C | PCP-GC |
Nodes | 5–50 | 15 | 30,30 | 20 | 25 | 30,30 | 10 |
Layers | 1–3 | 1 | 2 | 1 | 1 | 2 | 1 |
Activation function | Identity, tanh, relu | tanh | relu | relu | relu | relu | relu |
Epochs | 20,30..100 | 100 | 30 | 90 | 70 | 30 | 50 |
