Fig. 2: Results using ImageCCA for three different data sets. | Nature Communications

Fig. 2: Results using ImageCCA for three different data sets.

From: Joint analysis of expression levels and histological images identifies genes associated with tissue morphology

Fig. 2: Results using ImageCCA for three different data sets.

We report images sampled from those with the most extreme magnitude positive and negative (10% and 90% in a linear ranking) CCA variable values, and top two GO terms that are most enriched with the corresponding genes with extreme loading values in the same component. BP biological process, CC cellular component, MF molecular function. The p-values reported are uncorrected Fisher’s exact tests. Panel a: the first component of the BRCA ImageCCA results; Panel b: the first component of the LGG ImageCCA results; Panel c: three components of the GTEx ImageCCA results.

Back to article page