Fig. 2: CAGE tags initiating at STRs are truly 5’-capped. | Nature Communications

Fig. 2: CAGE tags initiating at STRs are truly 5’-capped.

From: Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network

Fig. 2: CAGE tags initiating at STRs are truly 5’-capped.

G bias in ENCODE CAGE tags (bam files from nuclear fraction, polyA+) was assessed at FANTOM5 CAGE peaks assigned to genes (positive control) and CAGE peaks initiating at STRs. G bias at pre-microRNA 3' ends was also assessed as a negative control. Five libraries were analyzed corresponding to A549 (replicates 3 and 4), GM12878, HeLa-S3, and K562 cells. The number of intersecting tags in each case is indicated in the bracket.

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