Table 1 Efficient enrichment of mobile element signals in nanopore reads.
From: Cas9 targeted enrichment of mobile elements using nanopore sequencing
MEI | Run | Flow cell | Read number | On-target | Close-target | Off-target (%) | |
|---|---|---|---|---|---|---|---|
Reference (%) | Non-reference (%) | Reference (%) | Â | ||||
Individual | |||||||
 L1Hs | ABB607 | Flongle | 4102 | 49.6 | 7.3 | 16.8 | 26.3 |
 AluYb | ACK645 | 2271 | 40.2 | 6.5 | 1.0 | 52.2 | |
 AluYa | ACK655 | 12,513 | 18.0 | 5.8 | 10.3 | 65.9 | |
 SVA_F | ACK629 | 14,106 | 3.7 | 2.1 | 3.7 | 90.6 | |
 SVA_E | ABO395 | 7297 | 1.7 | 0.6 | 0.2 | 97.5 | |
 L1Hs | FAL11389 | MinION | 110,029 | 30.7 | 4.3 | 37.9 | 27.1 |
Pooled | FAO84736 | MinION | 105,410 | 20.1 | 3.2 | 38.4 | 38.3 |
 L1Hs |  |  |  | 8.9 | 1.6 | 33.9 |  |
 AluYb |  |  |  | 7.0 | 1.2 | 3.2 |  |
 AluYa |  |  |  | 2.8 |  |  |  |
 SVA_F |  |  |  | 1.2 | 0.4 | 1.3 |  |
 SVA_E |  |  |  | 0.2 |  |  |  |
