Fig. 2: Classification of biological and crystal interfaces using DeepRank.
From: DeepRank: a deep learning framework for data mining 3D protein-protein interfaces
A, B. Illustration of the two types of interfaces, i.e., biological and crystal interfaces, found in a crystal. Protein molecules are orderly arranged in repetitive crystal units. Crystallographic interfaces can originate from the seeming interaction from the two neighboring crystal units, which may or may not represent biological interactions. The crystal structure shown in B corresponds to PDB entry 1ZLH. C Confusion matrix of DeepRank on the DC test dataset. D Accuracy of DeepRank, PISA, and PRODIGY-crystal on the DC dataset.
