Fig. 4: Single-stranded DNA test case.
From: Polyply; a python suite for facilitating simulations of macromolecules and nanomaterials
a Average radius of gyration from an ensemble of polyT generated with polyply using two different persistence lengths (1.4 nm; 3.2 nm) compared to the radius of gyration from SAXS. b polyT chains of 100 bases corresponding to the average radii of gyration in (a). The principle components have been aligned. c Schematic of generating circular ssDNA for the full genome of the porcine virus. Final coordinates are shown on the right with the DNA colored by nucleobases and the virus capsid in cyan. The image of the genome sequence was adopted from ViralZone SIB Swiss Institute of Bioinformatics. Source data are provided as a source data file.
