Table 1 Derived helical propensity for each amino acid in descending order.
From: Helical structure motifs made searchable for functional peptide design
AA | HPa.a. | NAa.a. | HPNA (HPa.a./NAa.a.) | Helical propensity, log (HPNA) |
|---|---|---|---|---|
Alanine (A) | 0.109 | 0.083 | 1.320 | 0.277 |
Tryptophan (W) | 0.014 | 0.011 | 1.284 | 0.250 |
Glutamate (E) | 0.084 | 0.067 | 1.246 | 0.220 |
Leucine (L) | 0.115 | 0.097 | 1.192 | 0.175 |
Glutamine (Q) | 0.045 | 0.039 | 1.145 | 0.135 |
Tyrosine (Y) | 0.033 | 0.029 | 1.130 | 0.122 |
Lysine (K) | 0.064 | 0.058 | 1.100 | 0.095 |
Methionine (M) | 0.026 | 0.024 | 1.079 | 0.076 |
Arginine (R) | 0.059 | 0.055 | 1.067 | 0.065 |
Phenylalanine (F) | 0.038 | 0.039 | 0.984 | −0.016 |
Isoleucine (I) | 0.058 | 0.059 | 0.978 | −0.022 |
Histidine (H) | 0.022 | 0.023 | 0.969 | −0.031 |
Aspartate (D) | 0.052 | 0.055 | 0.952 | −0.049 |
Asparagine (N) | 0.038 | 0.041 | 0.936 | −0.066 |
Threonine (T) | 0.049 | 0.053 | 0.918 | −0.086 |
Valine (V) | 0.062 | 0.069 | 0.902 | −0.103 |
Cysteine (C) | 0.012 | 0.014 | 0.876 | −0.132 |
Serine (S) | 0.053 | 0.066 | 0.804 | −0.218 |
Glycine (G) | 0.046 | 0.071 | 0.650 | −0.431 |
Proline (P) | 0.021 | 0.047 | 0.445 | −0.810 |