Fig. 6: Signatures of selected signals in chromosomes 1, 2, 3, and 5 of M. integrifolia genome.
From: Signatures of selection in recently domesticated macadamia
The upmost dotplot is nucleotide diversity (π) values, red indicate varieties and green line indicate wild group; the second lay is fixation index (FST) between the wild and cultivated macadamia accessions; the third lay is Tajima’s D values, red indicate varieties and green line indicate a wild group. The bottom is the genome-wide distribution of selective-sweep signals identified based on the cross-population composite likelihood ratio test (XP-CLR). TT12, TRANSPARENT TESTA; SDR short-chain dehydrogenase reductase, ANS anthocyanidin synthase.
