Table 2 Top 20 most enriched TF motifs in Non-TO and TO-derived basal cells.

From: Malfunction of airway basal stem cells plays a crucial role in pathophysiology of tracheobronchopathia osteoplastica

Non-TO

TO

Transcription factor

% of Targets with motif

P-value

Transcription factor

% of Targets with motif

P-value

p63

15.75%

1e−383

FRA1

15.85%

1e−798

p53

6.87%

1E−258

BATF

17.67%

1e−756

p73

4.50%

1E−227

ATF3

17.93%

1e−744

FRA1

10.97%

1E−126

JUNB

15.66%

1e−730

FRA2

9.71%

1E−123

FRA2

13.76%

1e−722

FOSL2

7.43%

1E−119

AP-1

18.80%

1e−683

ATF3

12.11%

1E−115

FOSL2

9.92%

1e−590

JUNB

10.55%

1E−115

JUN-AP1

7.55%

1e−501

BATF

11.75%

1E−108

EHF

19.85%

1E−201

AP-1

12.72%

1E−102

ELF3

12.94%

1E−189

JUN-AP1

5.62%

1E−101

ELF5

12.43%

1E−181

NF1-halfsite

27.01%

1E−87

ELF4

14.27%

1E−148

SIX1

5.21%

1E−62

ETS1

12.89%

1E−102

SIX2

14.66%

1E−60

GRHL2

6.40%

1E−99

NF1

7.87%

1E−53

ERG

20.67%

1E−97

FOX

14.47%

1E−47

ETV1

16.40%

1E−91

FOXM1

16.36%

1E−46

SPDEF

12.70%

1E−81

FOXA1

34.23%

1E−44

ETV2

12.18%

1E−69

TEAD4

13.10%

1E−43

GABPA

10.48%

1E−68

TEAD1

14.77%

1E−41

RUNX

9.02%

1E−58

  1. Motif enrichment analysis of differential ATAC-Seq peaks in TO versus Non-TO by HOMER. P values were calculated following findMotifsGenome.pl algorithm.