Fig. 5: TE classification according to three frequency classes: rare (present in <10 of the strains), common (present in ≥10 and ≤95% of the strains) and fixed (present in >95% of the strains). | Nature Communications

Fig. 5: TE classification according to three frequency classes: rare (present in <10 of the strains), common (present in ≥10 and ≤95% of the strains) and fixed (present in >95% of the strains).

From: Population-scale long-read sequencing uncovers transposable elements associated with gene expression variation and adaptive signatures in Drosophila

Fig. 5: TE classification according to three frequency classes: rare (present in <10 of the strains), common (present in ≥10 and ≤95% of the strains) and fixed (present in >95% of the strains).

a Number of TEs and their classification according to their frequency in the population using from 5 to 47 strains. The standard deviation was calculated by taking 30 random samples of strains for each case. Data are presented as median values ±standard deviation. b Intersection of the different sets of common TEs identified taking into account 10, 20, 30, 40 and 47 strains at random. c Venn diagrams depicting the intersection of orthologous TEs defined by geographic origin. The ALL diagram represents all TEs regardless their frequency class, while the rare, common and fixed diagrams are defined by the TEs of each of the classes in each set.

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