Fig. 4: Spatial patterns and drivers of diversity. | Nature Communications

Fig. 4: Spatial patterns and drivers of diversity.

From: Influence of nutrient supply on plankton microbiome biodiversity and distribution in a coastal upwelling region

Fig. 4

a Map showing the mean alpha diversity for all ASVs for each station. b mean alpha (blue) and gamma diversity (green) per station for all ASVs as a function of distance to shore (km). Shannon index was used as the primary measure of diversity and was calculated as the mean per station per cruise for this analysis. Relationships are fit as a generalized additive model (GAM) with a 95% confidence interval. c map showing the mean alpha diversity for diatoms for each station. d mean alpha (blue) and gamma diversity (green) per station for diatoms as a function of distance to shore (km). Relationships are fit as a generalized additive model (GAM) with a 95% confidence interval (shading). e relative importance of all explanatory variables (mean and coefficient of variation) used to predict mean alpha diversity at a given station. Relationships between environmental variables and diversity were assessed via a generalized linear model with a gaussian fit. Larger circles represent lower AIC values within a column. Circles and their associated AIC values should not be compared across columns. Color represents the correlation coefficient between each explanatory variable and mean alpha diversity. Gray circles represent relationships that are not significant (p > 0.05). Relationships were analyzed between diversity and the mean and coefficient of variation (Coeff. Var.) of environmental variables. Environmental variables included: temperature (Temp), salinity, NO3, PO4, SiO4, chlorophyll a (Chl-a), and nitracline depth (NCD).

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