Table 1 Summary of key parameters for hybrid assembly and Illumina-only assembly per sample.
From: Short- and long-read metagenomics expand individualized structural variations in gut microbiomes
Hybrid assembly | Illumina-only | |
|---|---|---|
Raw reads | 1.47E6 (3.97E5−9.23E6)a | 5.64E7 (3.41E7−1.07E8) |
Total nucleotide of raw reads | 6.08E9 (1.72E9−2.08E10)a | 8.46E9 (5.12E9−1.61E10) |
Contigs | 3.55E5 (1.12E5−7.77E5) | 4.29E5 (1.35E5−8.63E5) |
Total nucleotide of contigs | 3.82E8 (1.69E8−7.05E8) | 3.64E8 (1.60E8−6.63E8) |
Contig N50 | 9283 (2002-31,606) | 2962 (745-11,932) |
MAGs numbers | 50 (21-196) | 44 (14-74) |
