Fig. 4: Pseudotime analysis of silk gland cells using Monocle2.
From: A single-cell transcriptomic atlas characterizes the silk-producing organ in the silkworm
a Trajectories of ASG, MSG, and PSG cells along pseudotime. The colors from dark (purple) to light (yellow) represent the forward order of pseudotime. b RNA velocity map of ASG, MSG, and PSG cells. The length of the arrows indicates the rate of cell development, the direction of the arrows indicates the direction of cell development. c Pseudotime heatmap of the top 10 marker genes (on the right of heatmap) of each cluster in the ASG, MSG, and PSG. ASG anterior silk gland, MSG middle silk gland, PSG posterior silk gland.
