Fig. 8: Intrabody30 (Ib30) stabilizes the active conformation of βarr1.
From: Allosteric modulation of GPCR-induced β-arrestin trafficking and signaling by a synthetic intrabody

a Structural snapshots of βarr1 crystal structures in complex with V2RppWT (PDB: 4JQI) and V2RppT360-1 (PDB: 7DFA). The superimposed structures display repositioning of the V2RppT360-1 N-terminal segment harboring Thr360 residue (cyan) relative to the V2RWT (green). Also, changes in ionic interactions of Thr360 with neighboring residues are shown. For the V2RWT bound βarr1, Thr360 engages with Lys294, Lys11, and Arg25. In the V2RT360-1 bound state, the Thr360 is non-phosphorylated, and the side-chain of Thr359 is repositioned to interact with Lys11. b−d MD simulation of βarr1 in complex with either V2RppWT or V2RppT360A based on the crystal structure of V2Rpp-βarr1 (PDB: 4JQI) reveals enrichment of inactive-like conformations of βarr1 in V2RppT360A-bound conformation. However, the binding of Fab30 to V2RppT360A-βarr1 complex robustly enriches the active-like conformational population of βarr1 as assessed by inter-domain rotation. The blue line in 8b represents the rolling averages, while the grey line represents the original values for interdomain rotation per frame. Source data are provided as a Source Data file.