Fig. 5: Identification of SV genes in MERFISH data.
From: Identification of spatially variable genes with graph cuts
a Bar charts showing the number of SV genes identified by scGCO, spatialDE, SPARK and trendSceek. b Venn diagram showing the overlap of SV genes identified by different methods. c Bar charts shows the number of blank control genes identified by scGCO, spatialDE, SPARK and trendSceek as SV genes. d Graph cuts optimized clustering of cells showing two cell populations. e Graph cuts of representative SV genes identified by scGCO. Thick black lines denote the boundaries of different segments. Cells are colored according to gene expression levels.
