Fig. 3: A performance indicator of CAPITAL as a function of the noise level on the synthetic datasets.
From: Alignment of single-cell trajectory trees with CAPITAL
The horizontal axis indicates the standard deviation of Gaussian noise that was independently added 100 times to each of the expression counts obtained by splitting a single-cell count matrix in the 68 synthetic datasets, which results in 95,200 pairs of trajectories. a Performance evaluation in cluster–cluster alignment. b Performance evaluation in cell–cell alignment. 10 nearest neighbors were considered to build the nearest neighbor graphs in all the tests. The box plots show the median with bounds for the first and the third quartiles, and the whiskers indicate the minimum and the maximum that exclude outliers represented by points. Source data are provided in the Source Data file. ATC average trajectory conservation.
