Table 2 Description of differences between the newly sequenced and de novo assembled H37Rv strains, TMC102, NR123 and H37Rv1988 identified by DNAdiff
From: A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome
R# | Description |
|---|---|
R11 | 117 bp insertion in PE_PGRS5 (rv0297) in TMC102 and H37Rv1998 |
R12 | 123 bp insertion in intergenic region between rv0487 and rv0488 in TMC102 and H37Rv1998 |
R13 | Additional 1356 bp IS6110 transposon element insertion between plcD (rv1755c) and cut1(rv1758) in TMC102 |
R14 | 114 bp insertion in rv2090 (Probable 5’−3’ exonuclease) in TMC102 |
R15 | 14 bp tandem duplication between Nrdh (Rv3053c) and Rv3054c in TMC102 |
R16 | 1356 bp IS6110 transposon element insertion between higA (Rv1956) and another IS6110 transposon in TMC102 |
R17 | 9 bp tandem duplication in PE_PGRS51 (rv3367) in TMC102 |
R18 | 51 bp insertion in rv2680 in NR123 and H37Rv1998 |
R19 | 59 bp insertion in intergenic region between rv2980 and ddlA (rv2981c) in H37Rv1998 |
R20 | 9 bp tandem duplication in PE_PGRS57 (rv3514) in H37Rv1998 |
