Fig. 8: SPOC domains determine genomic localization. | Nature Communications

Fig. 8: SPOC domains determine genomic localization.

From: The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators

Fig. 8: SPOC domains determine genomic localization.The alternative text for this image may have been generated using AI.

a Cellular localization of SPOC proteins analyzed by immunofluorescence microscopy. Exemplary Airyscan images showing the localization of wild-type and SPOC-deleted proteins for PHF3, DIDO, SHARP, and RBM15 (green). DAPI and merged images are shown below. Localization of each protein of interest was acquired in biological duplicates. Scale bar = 10 μm. b Integrative Genomics Viewer (IGV) snapshots showing GFP-ChIP-seq reads and GFP-ChIP-qPCR analysis for XIST in SHARP-GFP, SHARP ΔSPOC-GFP, and untagged HEK293T cells. c IGV snapshots showing RNA-seq reads for XIST in SHARP-GFP and SHARP ΔSPOC-GFP cells. d IGV snapshots showing GFP-ChIP-seq reads and GFP-ChIP-qPCR analysis for BEX5 in PHF3-GFP, PHF3 ΔSPOC-GFP, and untagged HEK293T cells. e IGV snapshots showing GFP-ChIP-seq reads and GFP-ChIP-qPCR analysis for HOXA5 in PHF3-GFP, PHF3 ΔSPOC-GFP, and untagged HEK293T cells. The qPCR data in b, d, e are presented as mean ± standard deviation of four individual experiments, individual data points are indicated as black dots. One-tailed, two-sample equal variance t-test was used to determine p-values. qPCR amplicons are indicated as red boxes. Source data are provided as a Source Data file.

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