Table 1 Units and parameters of the model
Symbol | Value | Quantity |
|---|---|---|
\(\bar{b}\) | – | Unit length (b ↔ 10 μm) |
kBT | – | Unit energy |
cs | – | Unit concentration |
\(\bar{\rho }\) | 1 | Mean cell density |
\({\eta }_{\max }\) | 4 | Maximum occupation number |
ε | 0.15 | Contact energy |
h | 1 | Film height expressed in millimeter |
κ | 0.85/1.2 | Field parameter as defined by Eq. (16) |
ccsm | 0.02 | Concentration around which consumption becomes non-constant (Eq. (6)) |
caer | 0.1 | Concentration below which aerotaxis sets in Eq. (7) |
χ | 2 | Aerotaxis strength (Eq. (7)) |
L | 100 | Lattice size |
\({T}_{{{{{{{{\rm{sim}}}}}}}}}\) | 106 | Simulated time in MC steps |