Fig. 1: Genome of T. grandis. | Nature Communications

Fig. 1: Genome of T. grandis.

From: The Torreya grandis genome illuminates the origin and evolution of gymnosperm-specific sciadonic acid biosynthesis

Fig. 1: Genome of T. grandis.

a Tree and fruit set of T. grandis. The lower panel shows the processed dry seed and its edible part (endosperm). b Circos plot of T. grandis genome and genomic features encoded by the chromosomes. Each feature was calculated based on a 10-Mb window across the chromosomes. Colored stars indicate the presence of telomeric sequences on 5’- (green) or 3’-end (orange) of the chromosome. c Distribution of LTR-RT insertion time. The left panel shows all members of Gypsy and Copia families and the top six most abundant subfamilies are shown on the right panel. d Ks distribution of orthologues among T. grandis, Sequoiadendron giganteum, Ginkgo biloba and Gnetum montanum. Ks of paralogues in T. grandis was fitted with Guassian mixture model and the putative ancient WGD is indicated. e Micro-collinearity between genomes of T. grandis, G. biloba and G. montanum. Source data are provided as a Source Data file.

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