Fig. 7: Substructure extraction. | Nature Communications

Fig. 7: Substructure extraction.

From: Single-step retrosynthesis prediction by leveraging commonly preserved substructures

Fig. 7: Substructure extraction.The alternative text for this image may have been generated using AI.

a Collecting atom environments, the atom environments of fingerprints 2076081310 and 897554406 in the product and the retrieved candidates are highlighted in green and blue, respectively. b Virtual number labeling and substructure isolation, the virtually labeled substructures are highlighted in green. c Model input, which is the SMILES strings of the substructures followed by the SMILES of fragments. The virtually labeled atoms are highlighted in green. “” in the model input is a special character indicating the beginning of product fragments' SMILES strings.

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