Table 1 Cryo-EM data collection and refinement statistics

From: Hydrophobic interactions dominate the recognition of a KRAS G12V neoantigen

 

V2-Fab–KRASG12V/HLA-A*03:01

(PDB ID 7STF)

Data collection

EM equipment

Titan Krios

Voltage (kV)

300

Detector

Gatan K3

Energy filter

Gatan Bioquantum

Pixel size (Ã…)

0.844

Electron dose (e−/Å2)

60

Defocus range (μm)

−0.8 to −2.0

Reconstruction

Software

RELION 3.1

Number of used particles

116,685

Symmetry imposed

C1

Overall resolution (Ã…)

3.14

Refinement

Software

Phenix

Cell dimensions

 a, b, c (Å)

70.05, 64.14, 145.17

 α, β, γ (°)

90, 90, 90

Model composition

 Protein residues

817

R.m.s. deviations

 Bonds (Å)

0.011

 Angles (°)

1.705

Ramachandran (%)

 Favorable

81.12

 Allowed

17.76

 Outlier

1.12

 Molprobity score

3.46