Fig. 2: The power is shown for different population prevalence, varying from 1% to 20%.

The generative model for Hazard is the proportional hazards model, and for Liability it is the liability threshold model. The simulation results are based on 10 replications. A The power, i.e. the fraction of causal SNPs detected for each method, without case ascertainment. B The power with case ascertainment, i.e. the number of individuals is subsampled to 10k cases and 10k controls.