Fig. 3: Mitochondrial genome phylogeny of C. glabrata strains from blood cultures of patients with bloodstream infections.

a Unrooted phylogenetic tree for all 94 strains, estimated using Maximum Likelihood with RaxML. Strains J1-J5 carried fewer mitochondrial nucleotide differences than did J6-J10, and they clustered in a clade with K, P and ST strains, in keeping with nuclear phylogeny. Strains J6-J10 (red rectangle) showed much higher divergence than did J1-J5, and fall outside of the clade that include strains J1-J5. b High resolution mitochondrial genome phylogeny of 10 C. glabrata strains from patient J. Alignment graph of mitochondrial genomes from the 10 patient strains (right), and corresponding unrooted phylogenetic tree (left). Coordinates of nucleotide position are shown on top of alignment. Gray colored positions represent nucleotides identical to the consensus. Black vertical bars show presence of SNPs or insertions, and black horizontal lines show deletions. Phylogeny was estimated using RaxML.