Table 1 Membrane Proteins that Co-immunoprecipitate with MeeF and MeeYa

From: TerC proteins function during protein secretion to metalate exoenzymes

MeeF-FLAG (heating)b

MeeY-FLAG (heating)b

MeeY-FLAG (pH)c

Functional annotation

 

Holotranslocon Proteins

SecY

  

Subunit of the SecYEG preprotein translocase

SecDF

SecDF

SecDF

PMF-dependent holotranslocon subunit

YrbF

  

Binds to SecDF as part of the holotranslocon (E. coli YajC ortholog; 34% identity)

 

Secretosome and Secretion-related Functions

PrsA

PrsA

PrsA

post-translocation molecular chaperone

HtpX

  

Quality control membrane protease

FtsH

FtsH

 

Quality control membrane protease

AtpA

AtpA

AtpA

ATP synthase (subunit alpha); intact ATP synthase interacts with SecYEG translocon43

AtpG

AtpG

 

ATP synthase (gamma subunit)

 

AtpF

 

ATP synthase, part of the Fo complex

  

AtpD

ATP synthase, part of the F1 complex (subunit beta)

 

Other Membrane Proteins

FloT

  

Flotillin, membrane-associated scaffold protein

FloA

FloA

 

Flotillin, membrane-associated scaffold protein

MalA

  

6-phospho-alpha-glucosidase

GlcD

  

possible glycolate oxidase subunit

NupN

  

lipoprotein, part of guanosine transporter

SwrC

SwrC

 

resistance-nodulation-cell division (RND)

SsdC

  

spore shape determinant C (mother cell)

OppF

OppF

 

Oligopeptide ABC transporter

OppB

  

Oligopeptide ABC transporter

FrlO

  

Aminosugar ABC transporter

SdhA

SdhA

 

succinate dehydrogenase (flavoprotein subunit)

FhuD

  

hydroxamate siderophore ABC transporter

 

QoxA

 

cytochrome aa3 quinol oxidase (subunit II)

QoxB

  

cytochrome aa3 quinol oxidase (subunit I)

MsmX

  

multiple sugar ABC transporter (ATP-binding protein)

FtsA

  

cell division protein, member of the divisome

YknW

YknW

 

modulator of ABC transporter assembly, SdpC secretion

  

MgtE

primary magnesium transporter

  1. aOnly integral membrane proteins are listed here. The interacting proteins for MeeF and MeeY include 12 of the 40 most abundant membrane proteins, as measured previously53, consistent with a physiologically relevant association with the secretosome complex.
  2. bImmunoprecipitated fractions were eluted by heating, samples were treated with 1% TritonX-100 and their western analysis is shown in Supplementary Fig. 6b.
  3. cImmunoprecipitated fractions were eluted by glycine (pH 3). The MeeY-FLAG sample is shown in Supplementary Fig. 6c.