Fig. 4: Cyclops RH and cortex cells display unique features preventing IT formation.
From: Single-cell analysis identifies genes facilitating rhizobium infection in Lotus japonicus
a UMAP of wild-type (WT) and cyclops control and M. loti infected susceptible zone root cells 5 dpi. b UMAP of wt RH and cortical cells expressing NF-YA1 (green) 5 dpi. c Upset plot comparing gene lists of RH and cortical cells expressing NF-YA1 (5_NF-YA1) with RH subclusters (sc) 5 and 6 and the infected cells ten dpi (infected 10 dpi). d UMAP of wt sc6 (turquoise) and cyclops sc5 (yellow) RH cells expressing five dpi. e Upset plot comparing gene lists of RH and cortical cells expressing NF-YA1 (5_C_NF-YA1) with nodule, bacteroid and infected cells 10 dpi (infected 10 dpi). Gene lists for all cell populations can be found in Source Data.
