Table 1 Metrics of the Heligmosomoides bakeri and Heligmosomoides polygyrus reference genomes

Species

H. bakeri

H. polygyrus

H. bakeri

H. bakeri

Accession

PRJEB57615

PRJEB57641

PRJEB15396

PRJEB1203

Version

nxHelBake1.1

ngHelPoly1.1

WBPS17

WBPS17

Reference

This work

This work

Chow et al. ⁴³

International Helminth Genomes Consortium⁶⁶

Span (Mb)

649.2

656.6

697.0

560.7

Number of scaffolds

321

1,278

23,647

44,726

Scaffold N50 (Mb)

110.8

107.4

0.2

0.04

Percentage of assembly in six chromosomes (%)

98.6

96.2

-

-

Number of contigs^a

3719

4738

56,301

81,726

Contig N50 (Kb)^a

293.0

291.5

42.6

12.8

Number of gaps

3398

3460

32,791

37,001

Span of Ns (kb)

679.4 (0.1%)

691.6 (0.1%)

4471.1 (0.6%)

3792.4 (0.6%)

QV

55.3

53.9

-

-

Genome BUSCO completeness (%)^b

92.0

93.7

94.3

77.0

Genome BUSCO duplication (%)^b

1.2

2.5

1.2

1.1

Number of protein-coding genes

19,117

20,622

23,471

27,459

Number of transcripts

28,195

24,144

25,215

27,459

Gene set BUSCO completeness (%)^b

92.8

94.0

90.5

62.2