Table 1 Statistics summary of reads and assembly
From: A genomic toolkit for winged bean Psophocarpus tetragonolobus
Pseudochromosome, integrated with genetic maps | |
|---|---|
Scaffolds assigned to LGs | |
Cross XB (FP15 x Ma3) | 34 |
Cross XT (Tpt10 x Ma3) | 36 |
Unassigned scaffolds to LGs | 10 |
Length of assigned sequences to LGs | 580,032,372 bp |
Length of unassigned sequences to LGs | 6,405,169 bp |
Min scaffold length (Mbp) | 0.096 |
Median scaffold length (Mbp) | 8.078 |
Mean scaffold length (Mbp) | 12.749 |
N50 scaffold length (Mbp) | 28.310 |
N50 contig length (Mbp) | 10.861 |
Max scaffold length (Mbp) | 42.435 |
Total scaffold length (Mbp) | 586.438 |
Repeat region of assembly (bp) | 202,036,684 |
Completeness of gene prediction (BUSCO) | |
Complete genes | 96.2% |
Complete and single copy | 93.8% |
Complete and duplicated | 2.4% |
Fragmented genes | 1.1% |
Missing genes | 2.7% |
Total BUSCO groups searched | 1614 |
