Table 2 Examples of impact of NMRlipids and other overlay databanks in different disciplines
From: Overlay databank unlocks data-driven analyses of biomolecules for all
Target group | Outcomes | Practical examples |
|---|---|---|
Computational and data scientists | Databanks with programmatic access, training sets for machine learning applications, automatic optimisation of simulation models | Programmatic access to all publicly available MD simulation trajectories, machine learning models predicting properties of complex biomolecular assemblies (Table 1), optimising force field and model parameters from atomistic to continuum scale |
Biomedical scientists | Applications of biomolecular modelling in new fields, coupling omics to biomolecular structure and dynamics | Anisotropic water diffusion for pharmacokinetics and MRI imaging applications (Fig. 5), properties of complex cellular structures based on composition analyses from omics |
Material scientists | Predictions of complex biomolecular material properties from data-driven and machine learning models | Optimising composition of lipid nanoparticle formulations for desired properties, predictions of bioinspired material properties |
Biophysicists | Novel analyses and predictions for properties of biomolecular assemblies and their compositions | Analyses of rare phenomena (for example, Lipid flip-flops and water permeation in Figs. 4 and 5), data-driven analyzes and machine learning models predicting correlations between properties and compositions of biomolecular assemblies (Figs. 2 and 5) |
Students and teachers | Graphical and programmatic access to biomolecular structure and dynamics | Illustration of disorder and dynamics in biomolecules, example data for bioinformatics and data-science courses |
Reviewers and publishers | Tool to facilitate FAIRness of data, transparency and reproducibility | All publicly available data can be included in an overlay databank irrespectively of its location |