Fig. 1: Population structure and linkage disequilibrium (LD) in the Z. tritici population (n = 103). | Nature Communications

Fig. 1: Population structure and linkage disequilibrium (LD) in the Z. tritici population (n = 103).

From: Quantitative pathogenicity and host adaptation in a fungal plant pathogen revealed by whole-genome sequencing

Fig. 1

a Admixture plot of the fungal population. Each vertical bar represents a single isolate and is colored according to the membership coefficient (Qi) to the three sub-population (K) clusters identified by STRUCTURE. b LD decay over physical distance. The r2 values were calculated between pairs of SNPs up to a physical distance of 20 kb and fitted against the physical distance using a non-linear model. The dotted orange line shows the distance (0.5 kb) at which LD decays at the r2 < 0.2 level.

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