Table 1 ISCU2-bound metal to ligand and sulfur to sulfur distances in various structures of free ISCU2 or core ISC complexes
Method | Solution NMR | X-ray | X-ray | Cryo-EM | Cryo-EM | Cryo-EM | Cryo-EM |
|---|---|---|---|---|---|---|---|
Resolution | – | 3.32 Å | 3.32 Å | 2.75 Å | 3.20 Å | 2.58 Å | 2.49 Å |
Reference | – | Boniecki (2017)15 | Boniecki (2017)15 | This work | Fox (2019)17 | This work | This work |
Organism | Mus musculus | Homo sapiens | Homo sapiens | Homo sapiens | Homo sapiens | Homo sapiens | Homo sapiens |
PDB code | 1WFZ | 5WLW | 5WLW | 8PKA | 6NZU | 8PK9 | 8PK8 |
Structure | Zn-U | (Zn-NIAU)2 (Zn 201.D) | (Zn-NIAU)2 (Zn 201.H) | (Fe-NIAU)2 | (Zn-NIAUX)2 | (Fe-NSIAUSX)2 | (Fe-NIAUSX)2 |
C69 | 2.3# | 6.1 | 4.8 | 3.7 | 10.0 | 9.6 | 9.7 |
D71 OD1 | 3.5 | 3.1 | 2.9# | 2.1# | 2.3# | 2.1# | 2.0# |
D71 OD2 | 2.1# | 2.4# | 2.4# | 2.2# | 2.3# | 2.1# | 2.1# |
C95 | 2.3# | 2.8# | 2.9# | 2.3# | 2.8a | 2.4# | 2.3# |
H137 NE2 | 2.1# | 2.8# | 3.2 | 4.8 | 10.5 | 9.8 | 9.9 |
C138 | 3.6 | 3.9 | 3.9 | 4.7 | 2.9# | 2.3# | 2.3# |
C381 (NFS1) | – | 2.9# | 2.8# | 2.4# | 12.3 | 2.3# | 20.9 |
Water | – | – | – | 2.0# | – | – | 2.0# |
C381-C69 | 4.2 | 4.8 | 4.3 | 9.6 | |||
C381-C95 | 5.2 | 4.8 | 3.8 | 3.4 | |||
C381-C138 | 6.3 | 6.5 | 6.5 | 3.6 |