Fig. 5: Enrichment of Fn and Fa in dMMR and HER2 overexpression patients.
From: Consistent signatures in the human gut microbiome of old- and young-onset colorectal cancer
The abundances of Fn (a) and Fa (c) were higher in dMMR patients compared to pMMR patients. The abundances of Fn (b) and Fa (d) were higher in HER2 overexpression patients compared to non-overexpression patients. Fn and Fa abundances were determined by genome-wide reads mapping to their reference genome (Methods). MMR and HER2 status were determined by immunohistochemistry test. RKPM: reads per kilobase per million reads. P values on the top were calculated by two-side Wilcoxon rank-sum test. The boxplot conventions are consistent with the description in Fig. 2.
