Table 3 Key genetic features of full-length plasmids in hypervirulent Klebsiella pneumoniae isolates

From: Genomic insights unveil the plasmid transfer mechanism and epidemiology of hypervirulent Klebsiella pneumoniae in Vietnam

ID

ST

Plasmid

Inc type

Size (bp)

Virulence genes

Tra genes

T4CP

Relaxase

oriT

AMR genes

Tellurite resistance genes

65

ST23

Helper

IncFII

74.503

-

TraX-D-G-H-B-Q-F-N-U-W-C-V-K-E-L-A-Y-M

+

+

+

-

-

Phagemid

FIB

106.291

-

-

+

-

-

-

-

75

ST86

Virulence

IncFIBK:HIB

195.619

iucABCD-iutA-

iroBCDN-rmpA/A2

-

+

-

-

-

+

Helper

IncFII:FIA:N

121.952

-

TrwJ-K-M-L-N-D-E-F-G-I,TraD-A-M-L-E-K-B-V-C-W-U-N-F-Q-H-G-D-X

+

+

+

-

-

78

ST23

Virulence

IncFIBK:HIB

230.437

iucABCD-iutA-

iroBCDN-rmpA/A2

-

+

-

+

-

+

Helper

IncFII

95.989

-

TraM-A-L-E-K-B-V-C-W-U-N-F-Q-H-G-D-X

+

+

+

DfrA1, QnrS, SulI, TetA

-

88

ST65

Virulence

IncFIBK:HIB

240.534

iucABCD-iutA-

iroBCDN-rmpA/A2

-

+

-

+

-

+

Helper

IncA/C:N

246.199

-

TraM-Y-A-L-E-K-B-V-C-W-U-N-F-Q-H-G-D-X

+

+

+

AadAB, Arr2, CTX-M-15, CmlA, DfrA, LAP, OXA-10, QnrS, FloR, StrAB, SulII, TetA, VEB-1

-

121

ST23

Virulence

IncFIBK:HIB

223.585

iucABCD-iutA-

iroBCDN-rmpA/A2

-

+

-

+

-

+

Phagemid

FIB

109.376

-

-

+

-

-

-

-

Helper

Unknow

176.873

-

TraN-G-H-F-U-W-C-V-B-K

+

+

-

-

-

146

ST25

Virulence (iuc3)

IncFIBK:FII

241.139

iucABCD-iutA

TraM-A-L-E-L-B-V-C-W-U-N-F-Q-H-G-D-X

+

+

+

TetA,Sul2,StrAB,DfrA14,AadA1,

OXA-10,FloR,CmlA,Arr

-

AMR

IncFIA:R

82.512

-

-

-

-

+

QnrS, LAP, Aac3

-

201

ST828

Virulence (iuc3)

IncFIBK:FII

194.876

iucABCD-iutA

TraX-D-G-H-B-Q-F-N-U-W-C-V-K-E-L-A-M

+

+

+

-

-

AMR

IncFII

82.668

-

TrbC-A-B, TraY-X-W-U-T-R-Q-P-O-N-M-L-K-J-I-H

+

+

+

LAP, QnrS, SulII, TetA

-

206

ST25

Virulence (iuc3)

IncFIBK:FII

198,96

iucABCD-iutA

TraX-I-D-G-H-B-Q-F-N-U-W-C-V-K-E-L-A-Y-M

+

+

+

TetA,QnrS,LAP-2,APH-(6),Sul2,StrAB,FloR

-

AMR

IncFII

77.321

-

TraO-P-Q-R-T-U-W-X-Y, TrbC-B-A

+

+

+

SulII, DfrA, DHA, QnrS, TetA

-

176

ST1049

Virulence

IncFIBK

299.039

iucABCD-iutA-

iroBCDN-rmpA/A2

-

+

-

+

-

+

Phagemid

FIB

111.709

-

-

+

-

-

-

-

410

ST420

Virulence

IncFIBK:HIB

219.173

iucABCD-iutA-

iroBCDN-rmpA/A2

-

+

-

+

-

+

Phagemid

FIB

112.412

-

-

+

-

-

-

-