Table 1 Examples of diverging decisions between imputation methods
Protein Group | F5H8B0 P08709 P08709-2 | A0A0D9SG88 | A0A075B6R2 | P02741 | I3L0A1 J3KPA1 P54108 P54108-2 P54108-3 | P59665 P59666 |
|---|---|---|---|---|---|---|
Gene | F7 | CFH | IGHV4-4 | CRP | CRISP3 | DEFA1B DEFA3 |
None (ref.) | 0.954 | 0.117 | 0.000 | 0.030 | 0.018 | 0.365 |
DAE | 0.916 | 0.022 | 0.000 | 0.038 | 0.001 | 0.025 |
TRKNN | 0.470 | 0.059 | 0.000 | 0.029 | 0.000 | 0.082 |
VAE | 0.918 | 0.038 | 0.000 | 0.039 | 0.000 | 0.023 |
RF | 0.915 | 0.061 | 0.000 | 0.040 | 0.000 | 0.061 |
CF | 0.841 | 0.079 | 0.000 | 0.031 | 0.001 | 0.022 |
Median | 0.937 | 0.113 | 0.000 | 0.030 | 0.051 | 0.373 |
RSN | 0.082 | 0.951 | 0.080 | 0.052 | 0.745 | 0.012 |
QRILC | 0.002 | 0.727 | 0.003 | 0.062 | 0.626 | 0.029 |
