Fig. 3: Within-host E. coli diversity in the three cohorts. | Nature Communications

Fig. 3: Within-host E. coli diversity in the three cohorts.

From: Deep sequencing of Escherichia coli exposes colonisation diversity and impact of antibiotics in Punjab, Pakistan

Fig. 3

This plot displays the number of E. coli high-quality BAGs identified within each sample as a violin plot for each of the three cohorts. Outpatients from the Manga Mandi hospital are labelled with either “Primary” (green, data presented from 427 outpatients) or “Follow-up” (orange, data presented from 431 outpatients). Community participants are labelled with “Community” (purple, data presented from 376 participants). The width of the violin corresponds to the fraction of samples containing the number of E. coli lineages (rows). The embedded box shows the 25–75% quantile range and the whisker shows the 75–100% quantile range. The white circle denotes the median. Source data are provided as a Source Data file.

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