Fig. 6: Phylogenetic trees embedding the Punjab bin-assembled genomes into international reference sequences. | Nature Communications

Fig. 6: Phylogenetic trees embedding the Punjab bin-assembled genomes into international reference sequences.

From: Deep sequencing of Escherichia coli exposes colonisation diversity and impact of antibiotics in Punjab, Pakistan

Fig. 6

Panels contain the sequences for ST131 (a), ST38 (b), and ST69 (c). The tips labelled with ‘* ’ correspond to the BAGs from the current study, the tips with label ‘+’ to carbapenemase-producing isolates from Norwegian patients with recent travel history, and the tips with the label ‘o’ to carbapenemase-producing isolates from Norwegian patients without recent travel history. The bars on the right-hand side of each panel denote the subcontinent (UN M49 standard) the sequence was obtained from, if available. In panel (a) the edges in the phylogeny are coloured according to the ST131 clade the leaves belong to when the clade assignments were available in the source data. Source data are provided as a Source Data file.

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