Table 1 The consistent analysis between tissue-specific expression genes identified in RNA-Seq and ATAC-Seq

From: Multi-omic characterization of allele-specific regulatory variation in hybrid pigs

 

Tissue-specific peaks annotated gene number (fold change >= 2)

Tissues-specific expression gene number (fold change >=16)

Overlapped genes number

Enrichment score

P value

Brain

1245

388

149

8.1

0.00001

Liver

109

180

15

15.4

0.00001

Muscle

311

131

35

17.2

0.00001

Placenta

1849

268

100

4

0.00001

  1. Note: P-value was calculated through permutation based test.
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