Fig. 4: Simulation results with real LD patterns derived from UK Biobank data. | Nature Communications

Fig. 4: Simulation results with real LD patterns derived from UK Biobank data.

From: A robust cis-Mendelian randomization method with application to drug target discovery

Fig. 4

Top: Scenario 1 with SNPs in \({{{{{{{\mathcal{I}}}}}}}}_{X}\) and \({{{{{{{\mathcal{I}}}}}}}}_{Y}\), and corresponding genetic effect sizes specified according to real data. Bottom: Scenario 2 with SNPs in \({{{{{{{\mathcal{I}}}}}}}}_{X}\) and \({{{{{{{\mathcal{I}}}}}}}}_{Y}\), and corresponding genetic effect sizes randomly generated. From left to right are empirical type-I error under the null, power under the alternative, and root mean squared error (RMSE) under the null. Colors represent different methods being compared. Source data are provided as a Source Data file.

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