Table 3 Extraction and sequencing details for the eastern water dragon specimens

From: Century-old chromatin architecture revealed in formalin-fixed vertebrates

Specimen

Archival tissue weight (mg)

DNA yield (ng/mg tissue)

Raw read pairs (M)

Reads mapping (%)

Mean insert size (bp)

Mean genome coverage (X)

1905M

82

0.08

146

40

74

5

1990M

29

0.24

151

28

65

3.2

1992M

45

0.12

171

32

68

4.3

2001F

200

0.25

162

49

76

7.1

2001M

92

0.63

154

58

78

8.1

  1. Summary of the extraction and sequencing results for five archival eastern water dragon specimens processed with archival MNase treatment. For each specimen, we processed the available mass of archival liver tissue (reported in mg) and report DNA yield in ng/mg. For all tissues, we report DNA yield in ng/mg of tissue, the number of raw read pairs (millions), the percentage of raw reads mapping to the reference genome, the mean insert size of mapped reads in base pairs and the mean genome coverage after de-duplication and GC correction.
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