Table 1 Complete genomes of V. cholerae O1 used in this study

From: Genomic evidence of two-staged transmission of the early seventh cholera pandemic

Strain	Year	Location	Source^a	Original laboratory identification	Genome sequence reference	genome completeness
C5	1957	Indonesia	GCF_001887395^b		⁸	closed
E9120	1961	Indonesia	GCF_001887655^b		⁸	closed
M803	1961	Hong Kong	Institut Pasteur	HK1	this study	closed
E1162	1962	China	GCF_001887495^b		⁸	closed
M805	1963	Cambodia	Institut Pasteur	930059	this study	closed
M808	1969	Vietnam	Institut Pasteur	1536	this study	closed
M807	1969	Vietnam	Institut Pasteur	601	this study	closed
M686	1968	Thailand	AFRIMS	SP-EV-29-1	this study	closed
M820	1978	Malaysia	Institut Pasteur	EB 251/1MR	this study	closed
M811	1971	Burma	Institut Pasteur	930029	this study	not closed
M806	1964	India	Institut Pasteur	CRC1106^c	this study	closed
M804	1962	India	Institut Pasteur	930030	this study	closed
CRC711	1964	India	GCF_001887435^b		⁸	closed
M812	1971	Chad	Institut Pasteur	930046	this study	closed
M815	1973	Philippines	Institut Pasteur	430035	this study	not closed
M813	1972	Senegal	Institut Pasteur	9292	this study	closed
M819	1975	Germany	Institut Pasteur	232	this study	closed
M814	1972	Morocco	Institut Pasteur	113	this study	closed
M818	1975	Comoros Islands	Institut Pasteur	102	this study	closed
M809	1970	Sierra Leone	Institut Pasteur	930037	this study	closed
M810	1970	Ethiopia	Institut Pasteur	930038	this study	closed
M647	1970	Bangladesh	CCUG	13119	this study	closed
N16961	1975	Bangladesh	GCF_900205735^b			closed
M795	1976	Bangladesh	University of Maryland	30167	this study	closed
P27459	1976	Bangladesh	GCF_013085125^b		⁷⁰	closed
M714	1979	Bangladesh	AFRIMS	96A/CO	this study	not closed
M646	1979	Bangladesh	CCUG	9193	this study	closed
M650	1976	India	Institut Pasteur	762/76	this study	not closed
E7946	1978	Bahrain	GCF_013085165^b		⁷⁰	closed

^aInstitut Pasteur, Paris, France; AFRIMS, Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand; CCUG, Culture Collection of the University of Goteborg, Goteborg, Sweden; University of Maryland, Centre for Vaccine Development, University of Maryland, Baltimore.
^bNCBI RefSeq sequence.
^cThis strain was sequenced previously using PacBio (accession number: GCF_001887455.1)⁸ but re-sequenced in this study.

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Table 1 Complete genomes of V. cholerae O1 used in this study

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