Table 1 Summary of data sets used in this publication
From: Reconstructing the regulatory programs underlying the phenotypic plasticity of neural cancers
Study | Data repository | Disease |
|---|---|---|
Bi et al., 2021 | Renal cell carcinoma | |
Caron et al., 2020 | Acute lymphoblastic leukemia | |
Chen et al., 2021 | Prostate cancer | |
Couturier et al., 2020 | Developing brain | |
Couturier et al., 2020 | Glioblastoma | |
Darmanis et al., 2017 | Glioblastoma | |
Eze et al., 2021 | Developing brain | |
Hamed et al., 2022 | GEO: GSE200202 | Developing brain |
Hovestadt et al., 2019 | Medulloblastoma | |
Hwang et al., 2022 | Pancreatic ductal adenocarcinoma | |
Ji et al., 2020 | Squamous cell carcinoma | |
Kildisiute et al., 2021 | Neuroblastoma | |
Kildisiute et al., 2021 | Normal fetal adrenal gland | |
Kürten et al., 2021 | Head and neck squamous cell carcinoma | |
Larsson, Dalmo et al., 2021 | ArrayExpress E-MTAB-9296 | Glioblastoma |
Leblanc et al., 2022 | GEO: GSE173278, GSE193884 | Glioblastoma |
Luo et al., 2021 | Short Read Archive: GSE156633 | Developing cerebellar granule |
Luo et al., 2021 | Short Read Archive: GSE156633 | Medulloblastoma |
Ma et al., 2019 | Hepatocellular carcinoma | |
Manno et al., 2021 | Sequence Read Archive: PRJNA637987 | Developing brain |
Neftel et al., 2019 | Glioblastoma | |
Ocasio et al., 2019 | GEO: GSE129730 | Medulloblastoma |
Ocasio et al., 2019 | GEO: GSE129730 | Cerebellum |
Pelka et al., 2021 | Colorectal cancer | |
Qian et al., 2020 | Lung cancer | |
Qian et al., 2020 | Ovarian cancer | |
Rendeiro et al., 2020 | Chronic lymphocytic leukemia | |
Riether et al., 2020 | Acute myeloid leukemia | |
Wang et al., 2019 | Glioblastoma | |
Weng et al., 2019 | GEO: GSE122871 | Developing brain |
Wu et al., 2020 | Acute myeloid leukemia | |
Wu et al., 2021 | Breast cancer | |
Zhou et al., 2021 | Osteosarcoma | |
PBMC | Human blood cells |
