Fig. 3: Condensate-forming proteins show distinct phase behavior in advancing vs. trailing half of the deformed nucleus. | Nature Communications

Fig. 3: Condensate-forming proteins show distinct phase behavior in advancing vs. trailing half of the deformed nucleus.

From: Chromatin compaction during confined cell migration induces and reshapes nuclear condensates

Fig. 3

a Schematics of Corelet activation experiment to test whether Corelet droplets prefer to nucleate in the trailing half. b Scatterplot shows the size difference of corelet droplets post 3-min activation in trailing, middle (a narrow region in 2 µm channel), and advancing halves. **p = 0.002578 and ***p < 0.001 according to the one-way ANOVA test (two-tailed). Error bars are standard deviations of n = 244, 23, and 109 Corelet condensates in n = 14 cells for trailing, middle, and advancing groups, respectively, in N = 3 independent replicates. c Chromatin mechanics probed by light-induced corelets shows the difference in advancing vs. trailing half in n = 16 cells at P = 0.5, in N = 3 independent replicates. Pairwise MSD shows a difference in the mobility of droplet populations in the two halves. d Representative cell with de novo Corelet droplets forming only in the trailing half. Scale bar: 5 µm. e De novo formation of 53BP1 condensates as the nucleus migrates through confinement. Condensates localize at chromatin-poor regions (right). Magenta: miRFP670-53BP1, green: H2B-mGFP. Scale bar: 5 µm. f De novo formation of BRD4 condensates as the nucleus migrates through confinement. Condensates localize at chromatin-poor regions (right). Magenta: BRD4-miRFP670, green: H2B-mGFP. Scale bar: 5 µm. g Condensation of 53BP1 is reversible. ***p < 0.001 according to one-way ANOVA (two-tailed). n = 33 nuclei (2 µm) and n = 14 nuclei (15 µm) in N = 3 independent experiments. h Condensation of 53BP1 biases towards the trailing half of the deformed nucleus. ***p < 0.001 by paired t test (two-tailed). The error bar is the standard deviation of n = 33 nuclei in N = 3 independent experiments. i Condensation of BRD4 is reversible. *p = 0.05 according to the one-way ANOVA test (two-tailed). n = 32 nuclei (2 µm) and n = 13 nuclei (15 m) in N = 3 independent experiments. j Condensation of BRD4 biases towards the trailing compartment of the deformed nucleus. *** p < 0.001 according to t test (two-tailed). The error bar is the standard deviation of n = 33 nuclei in N = 3 independent experiments.

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