Table 1 Overview of innate lymphocytes

From: Approaches to investigate tissue-resident innate lymphocytes metabolism at the single-cell level

Immune cell subsets

Nomenclature

Surface markers

Transcription factors

Development

Tissue locations

Cytokine and effector profile

ILC

cNK, trNK

NK1.1, NKp46, CD49b

EOMES, T-bet

Bone marrow

Lymphoid and non-lymphoid tissues

IFNγ, TNFα, cytotoxic molecules

ILC1

NK1.1, NKp46, CD49a, CD200R1

HOBIT, T-bet

Bone marrow

Non-lymphoid tissues

IFNγ, TNFα

ILC2

ICOS, IL17Rβ

GATA-3, RORα

Bone marrow

Most abundant in the lung

IL-4, IL-5, IL-9, IL-13, AREG

ILC3

NKp46, AhR

RORγt, T-bet,

Bone marrow

Most abundant in the gut

IL-17, IL-22, GM-CSF

LTi

CCR6

RORγt

Bone marrow

Lymphoid tissues

IL-17, IL-22

γδ T cells

γδ17, γδIFN

CD27, CD45RB, CD44

RORγt, T-bet,

Thymus

Most abundant in the intestine, skin, brain, adipose tissue

IL-17, IFNγ

iNKT cells

NKT1

CD24lo, NK1.1hi, CD27hi, CXCR3+

T-bet

Thymus

Most abundant in liver, spleen, adipose tissue

IFNγ, IL-2, IL-4, IL-10, IL-17, TNF

NKT2

CD24lo, CD27hi, CD4+

GATA-3, PLZF

NKT17

CD24lo, CCR6+, CD103hi, SDC-1+

RORγt

NKT10

PD-1, ICOS, Nrp1

E4BP4