Fig. 5: Schematic representation of the Multistrap package and the benchmarking sets design.
From: multistrap: boosting phylogenetic analyses with structural information

a Visual representation of the multistrap procedure (input and outputs). The provided input tree has its branches evaluated for support using three independent replicate collections based on the same MSA. The multistrap values are eventually estimated by averaging these values. b Definition of the reference branches in the downsampling analysis. Given a tree, branch supports are independently evaluated using three distinct replicate collections based on the same MSA (IMD, ME and ML), and the final reference sets are assembled by considering all 7 possible intersections of branch sets having 80% support or more within the IMD, ME and ML initial support sets.