Fig. 4: Pseudotime analysis of all cotton ovules samples from −1.5-DPA to 1-DPA. | Nature Communications

Fig. 4: Pseudotime analysis of all cotton ovules samples from −1.5-DPA to 1-DPA.

From: Spatiotemporal transcriptome and metabolome landscapes of cotton fiber during initiation and early development

Fig. 4: Pseudotime analysis of all cotton ovules samples from −1.5-DPA to 1-DPA.The alternative text for this image may have been generated using AI.

a A pseudotime trajectory shows the distribution of cell clusters. The dashed arrow indicates the developmental direction of the pseudotime trajectory. b Proportion of pseudotime states in the four cotton ovule samples. c Pseudotime trajectories colored according to tissue type. d Heatmap clustering of key genes for developmental trajectories in all samples and expression kinetics of genes over pseudotime. The names of genes and cell types that determine the developmental trajectories are shown on the right side of the heatmap. Expression levels are indicated by the color ranging from blue (low) to red (high). Source data are provided as a Source Data file.

Back to article page