Table 1 System composition of molecular dynamics simulations
From: Structural basis for lipid-mediated activation of G protein-coupled receptor GPR55
all-atom system 1 | all-atom system 2 | all-atom system 3 | all-atom system 4 | Martini system 1 | Martini system 2 | |
|---|---|---|---|---|---|---|
Protein | 1 | 1 | 1 | 1 | 1 | 1 |
DOPC | 144 | 144 | 143 | 146 | 153 | 153 |
Cholesterol | 63 | 62 | 63 | 62 | 83 | 82 |
Ligand | 1 | 1 | 0 | 0 | 0 | 0 |
Water | 8021 | 8009 | 7998 | 8186 | 3529 | 3529 |
Cl ion | 5 | 5 | 5 | 5 | 5 | 5 |
