Fig. 6: c-di-GMP reversed the inhibitory effects of MbpR. | Nature Communications

Fig. 6: c-di-GMP reversed the inhibitory effects of MbpR.

From: A WYL domain transcription factor regulates Lactiplantibacillus plantarum intestinal colonization via perceiving c-di-GMP

Fig. 6

a–d EMSA detection of MbpR (a, b) and MbpRR192A (c, d) binding to the mbpB or mbpA coding DNA sequence (CDS) probe in the presence of different amounts of c-di-GMP. The probe was incubated with protein at room temperature for 30 min. The experiments were performed three times with similar results. e Intracellular c-di-GMP level of the wild type, Δ3DGC, and Δ2PDE mutants. f Relative mbpA and mbpB transcription level in Δ3DGC and Δ2PDE strains analyzed by RT-qPCR. g, h Fluorescence intensity of EGFP, which was expressed from the reporting plasmid under the control of mbpA (g) and mbpB (h) promoter, in the wild-type, Δ3DGC, and Δ2PDE strains. The Δ3DGC strain was constructed by deleting dgcD, dgcC, and dgcB. The Δ2PDE strain mutant was generated by deleting pdeD and pdeA. i A pathway for c-di-GMP mediating L. plantarum colonization (Created in BioRender. Zhang, J. (2025) https://BioRender.com/g28k816). At low c-di-GMP level, MbpR binds to the mucin-binding protein (MucBP) CDS and inhibits its transcription. After sensing unknown signals, the activated diguanylate cyclases or inhibited c-di-GMP phosphodiesterases maintain the intracellular c-di-GMP level at a high level. The elevated c-di-GMP level results in MbpR releasing from the CDS of MucBP and promotes MucBP expression, promoting the colonization of L. plantarum. RNAP: RNA polymerase. Data in (e–h) are presented as mean values ± standard deviations (SD). Error bars indicate the SD. Dots represent individual data. Statistical significance in (e, g, h) was analyzed using one-way Analysis of Variance (ANOVA) with Tukey’s multiple-comparison test. In (e, f): n = 3 biological repeats, In (g, h): n = 5 biological repeats. Source data are provided as a Source Data file.

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