Table 1 Hyperparameter search space for each method ranked in alphabetical order
From: Building a unified model for drug synergy analysis powered by large language models
Methods | Searching space |
|---|---|
BAITSAO | lr:[1e-5,1e-4]; Dropout:[0.1,0.3] |
BERT | epochs:[5,10]; lr: [1e-5,1e-4] |
DeepDDs | Optimal hyperparameters from ref. 19 |
DeepSynergy | Optimal hyperparameters from ref. 14 |
Lasso | alpha:[1,10] |
MARSY | Optimal hyperparameters from ref. 18 |
SVM | C:[1,5] |
TabNet | n_steps:[1,5]; n_a:[8,64]; n_d:[8,64]; gamma:[1.1,1.5] |
TreeComb | max_depth:[10, 100]; n_estimators:[10,50]; min_child_weight:[1, 3] |
